Similarity search across ~4.8M Logan metagenomic samples by Jaccard similarity. Submit an accession ID, a precomputed sketch, or your own FASTA/FASTQ files (sketched in your browser, without uploading the sequences), and retrieve results ranked by similarity.

Note: We report a sketch-based estimated Jaccard similarities between accessions, based on the set of non-singleton 31-mers in the raw reads of each accession. The sketch induces an approximation on the Jaccard similarities, therefore the estimate is returned with its 95% confidence interval. For more information about this search, see the GitHub repository.

If Min Similarity is set, all neighbors above this threshold are returned and Top K is ignored.

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Click to browse or drag & drop your sketch.bin

If Min Similarity is set, all neighbors above this threshold are returned and Top K is ignored.

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Click to browse or drag & drop FASTA/FASTQ, plain or gzipped